Table 1
Overview of analysis and reporting results in different subschemes of the 2016 ESP Lung EQA scheme
Subscheme EGFR ALK FISH + digital ALK IHC ALK IHC technical evaluation
Number of participants |
97 |
113 |
102 |
90 |
Number of countries |
28 |
26 |
31 |
30 |
Number of cases |
10 |
9 * |
5 |
5 |
evaluated Average analysis score |
92.0 % |
95.0 %* |
95.0 % |
83.2 % |
(%) Laboratories successful |
71.1 % |
82.3 %* |
88.2 % |
94.4 % |
(%) Incorrectly genotyped |
6.6 % |
0.7 % |
0.1 % |
N / A |
samples (%) |
( 64 / 970 ) |
( 7 / 1017 ) |
( 13 / 510 ) |
|
Laboratories with at |
43.3 % |
6.2 % |
9.8 % |
N / A |
least one incorrectly analyzed sample (%) Samples for which a |
0.1 % |
2.2 % |
0.8 % |
N / A |
technical failure |
( 1 / 970 ) |
( 22 / 1017 ) |
( 4 / 510 ) |
|
occurred (%) Laboratories with at |
1.0 % |
12.4 % |
2.9 % |
N / A |
least one technical failure (%) Number of laboratories |
95 |
107 |
88 |
N / A |
that submitted reports Average reporting |
86.1 % |
84.4 % |
84.0 % |
N / A |
score (%) Laboratories with the |
44.6 % |
43.0 % |
44.3 % |
N / A |
interpretation present and correct (%) |
|
|
|
|
N / A : not applicable . Written reports were not taken into account to determine successful participation on analysis level . For the technical evaluation , no written reports were scored . * 9 cases were included to calculate the performance score instead of 10 . The cut-off for successful participation was therefore defined as ≥88 % instead of ≥90 % for this subscheme only .
EQA provides laboratories with the opportunity to verify and validate their test methods , monitor their performance and compare to other laboratories worldwide
This manuscript highlights the results of the latest 2016 EQA scheme for EGFR , ALK and ROS1 analysis in NSCLC . Additionally , recommendations are made on further research on multiple healthcare levels that might contribute to an improved testing quality .
Methods The organisation of the ESP EQA schemes is performed in collaboration with the coordination centre ( BQA Research Unit of KU Leuven ), which is accredited according to the ISO 17043 standard for conformity assessment of proficiency testing . 9 The set-up of each ESP Lung EQA scheme is determined beforehand by a steering committee of international experts in molecular diagnostics , according to the guideline on the requirements of EQA programs in molecular pathology . 10
Registration was open to all laboratories worldwide . Participants received ten formalinfixed paraffin-embedded ( FFPE ) samples for EGFR variant analysis and five FFPE samples for ALK and ROS1 rearrangement testing . For ALK and ROS1 , laboratories could participate in a fluorescent in situ hybdrisation ( FISH ) and immunohistochemistry ( IHC ) subscheme . For FISH , five additional digital cases were provided for signal interpretation only . For IHC , participants were asked to send back their stained slides to the coordination centre , to evaluate the immunostaining quality by a team of international pathologists . The digital FISH images were
6 HHE 2018 | hospitalhealthcare . com available via a digital platform , along with digitised haematoxylin- and eosin-stained slides for pathologist review .
Participants were asked to analyse the samples using their routine procedures . To reflect clinical practice , the deadline for results submission was 14 calendar days after sample receipt . Scheme results were evaluated by a team of international assessors for each individual subscheme in agreement with the EQA guideline . 10 Every sample was awarded two points for a correct result , and points were deducted in case of an error . Successful participation for EGFR , ALK and ROS1 was defined as a score of ≥90 % of the total achievable score . For the technical evaluation of the immunostaining , a quality score on five points was awarded and successfulness was defined as a score of ≥3 / 5 . The average reporting score was defined by the scoring of seven different score criteria for variant analysis and IHC , and nine criteria for FISH , as defined by the guideline . 10 Participants could submit data and access their results via a password-protected central database on the ESP Lung EQA scheme website ( http :// lung . eqascheme . org ).
Results of the 2016 NSCLC EQA scheme are shown in Table 1 . Results from 2012 – 2015 EQA schemes have previously been published . 7 , 8 , 11 In total , 190 unique laboratories from 34 countries participated in 2016 . Thirty-one participants from 16 countries participated in all three markers ( ALK , ROS1 , and EGFR ).
Average analysis scores were all above 80 %. For